Showing posts with label porcupine abyssal plain. Show all posts
Showing posts with label porcupine abyssal plain. Show all posts

Tuesday, 7 July 2015

Gone fishing...

On the offchance(!) that you aren't currently following the official Porcupine Abyssal Plain (PAP) Observatory blog, I thought I'd leave you a wee link to the post I wrote for them at the weekend about our trawling work. Enjoy!

https://papobservatory.wordpress.com/2015/07/06/gone-fishing/

Bringing the nets on board

The armoured grenadier, Coryphaenoides armatus, caught from 4850 m down!

Some of the other animals from the trawl catches. Left: Brittle stars (Ophiuroidea); Middle top: A sea cucumber (Holothuroidea); Middle: an Abyssal Grenadier (Coryphaenoides profundicolus); Middle bottom: an isopod; Right: A sea spider (Pycnogonidae)

Thursday, 25 June 2015

Whales!

Last night we were joined by a family group of pilot whales just as we were finishing dinner and preparing ourselves for our first night of seafloor sampling. Incidentally, running up and down two flights of stairs to get your camera after eating a large amount of lasagne and banana bread (separately, not at once!) is not an entirely pleasant experience!

A large pod of pilot whales popped by the ship yesterday.

Pilot whales in the waves

Pilot whales are funny beasts. They have a very lazy way of rolling through the water, which makes them a bit difficult to take interesting photographs of because they don't do much other than breathe and pootle about. The calves tend to be a lot more active and tend to leap around a bit more which is VERY cute to see if you can find a family group! 

Photobombing whale

Family of pilot whales

This pod had a couple of calves with them that still had visible foetal bands, meaning they must have been pretty new! We got really lucky with this group, and they stayed near the ship for about two hours. Most of the photos I took were of small black fins in the distance (as is typical of photographing whales and dolphins), but they did briefly come right up close to us and I got a few photos that were a bit more reasonable!


This pilot whale calf was so young the foetal bands were still visible on its flanks.

We've also been seeing a few shearwaters over the past couple of days. I'm not completely sure what species of they are, but I suspect they're Cory's shearwaters, though that's based mostly on the fact that I've seen them out here before and these ones look a bit similar. If anyone with a better internet connection than me can check and let me know it'd be much appreciated!

I think this is a Cory's Shearwater... Is that right?

Anyway, we've been put on night duty for our mud-coring work so I'm going to try and grab a couple of hours of sleep before dinner. See you next time!

Wednesday, 24 June 2015

There's dolphins off the starboard bow!

As I mentioned in the last blog, we had to spend a couple of days travelling from Liverpool to Falmouth at the start of our cruise so that we could fix a problem with the ship (which went smoothly) and then transfer our remaining scientists on board ready to get to work. Because our research site is 300 km offshore, we tend not to see too much in terms of wildlife once we get over deep water so the extra time spent off the Welsh coast provided some nice opportunities for wildlife-spotting!

Hello down there!

We had really nice sightings of most of the usual suspects: kittiwakes, gulls, gannets and fulmars were the most common birds, as you'd expect really, but because we were a little further offshore we also had a few sightings of Manx shearwaters which was really nice. Shearwaters and petrels live almost entirely at sea (usually quite far offshore), and only come to shore to breed in burrows (a bit like puffins). Unfortunately, when they come ashore they're also nocturnal, which means your chances of seeing them are pretty small most of the time. I can't pretend I got any decent photos of them, but they are always nice to see!

A crappy photo of a distant Manx shearwater

We were also joined by a small pod of common dolphins en route, which looked like they had a calf or two with them. They didn't stay with us for too long, but they were bouncing around enough to grab a few shots! I've never had a great deal of luck photographing these guys because they move around so fast, but I'm pretty pleased with how these photos came out.

Common dolphins under a wave

 
Common dolphin
A small group of common dolphins leaping

Common dolphins

Oh - and we also briefly had a couple of stowaways with us too! They seem to have left us at Falmouth though so we won't be adopting them as cruise mascots!

A couple of racing pigeons briefly stowed away with us for a trip to Falmouth.

Tuesday, 23 June 2015

To the Abyss (again!)

It's nice to be back at sea!
 
Last Friday, I left Glasgow with one of my fish-ecologist colleagues to join the RRS Discovery for another cruise to the Porcupine Abyssal Plain (PAP) long-term survey site. This is my fourth trip out to the PAP in as many years now, and I must admit it's really nice to be back on a ship! 

Me and Jo, ready to sail!

Leaving a wet and rainy Liverpool

The main purpose of this particular cruise is to service the PAP monitoring buoy and download the data that it's been collecting for the past year. This includes oceanographic data (e.g. current speed, water temperature, salinity), as well as collections of the sinking particles of dead organisms, biological waste and other organic and inorganic materials that make up the "marine snow" which fuels the vast majority of deep-sea ecosystems.

The Porcupine Abyssal Plain (PAP) study site is about 300 miles south-west of Ireland

Recoving the PAP buoy in 2013

Taking a ship 300 miles offshore is not a simple (or cheap!) task however, and there's no point coming all the way out here just to service a buoy and go home again so we've got a full contingent of scientists ready to make the most of the opportunity to collect their own data from the PAP site. On this particular cruise, we've got teams who are interested in understanding how mid-water bacterial processes and communities are influenced by "marine snow" particles, as well as researchers who will be studying the plankton communities and oceanography of the site. We even have a couple of holographic cameras which can automatically assess the sizes of all the particles in a tiny patch of seawater and rebuild an image of them all! 

Some photos from the last time I was out here to fish in the abyss. Hopefully this time we'll catch even more!
 
As exciting as the midwater research is though, I am here with Jo Clarke from Glasgow University to go fishing! We're working with the "benthic" (seafloor) ecologists from NOC to help collect deep-water animals from the seabed using mud cores, grabs and a trawl. We're really here for the fish, so we're mainly interested in the fish samples, and are here to make sure that they get identified, processed and recorded correctly for any future work that might be done on them. We'll also be helping out with all the other benthic sampling that needs to be done which will largely involve dealing with a lot of mud!

Sieving mud samples isn't so bad really!

The megacorer is one of the standard sampling gears for getting good quality sediment and animal samples back from the seabed. We'll be seeing a lot of it over the next few days!


So far we've had a pretty quiet start to the cruise. We met the ship in Liverpool and then spent a couple of days steaming south to Falmouth so some repairs could be done to one of the ship's thrusters while we were still near the coast. Happily that all went well, and we reached Falmouth just after midnight on Sunday for a mini crew-swap before starting our voyage to the PAP site. We should arrive there tomorrow, ready to start working!

Saturday, 27 April 2013

Work, work, work (and sea monsters)

It's been a hectic two weeks.

Busy busy busy.

After the weather finally decided to stop chasing us around, we got ourselves over to our study site at the Porcupine Abyssal Plain to start what has probably been the most diverse range of deep-sea work I've encountered on a cruise! We've deployed and recovered environmental moorings, autonomous gliders, and a time-lapse camera ("Bathysnap") that's been photographing the seabed for the last 12 months; we've sliced mud, trapped amphipods and sampled a LOT of water!


Trawling in the Abyss

But the work that I came out here for was the trawling, and despite a couple of minor issues with the net along the way, we managed to catch ourselves a decent selection of fish which will help massively with confirming the species identifications of the fish I'm seeing in my photographs from the region. It's also a bit more data to add to our long-term dataset from the PAP which has been being added to gradually over the last 20 years and is one of only two such datasets to exist in the world, so all of this is pretty valuable.

The benthic fishes include the grenadiers (top four images) and eels (bottom image).
My primary interest is in the benthic fish (the ones that live on or close to the seafloor), like the ones in the image above. However, from a purely photographic point of view it's the pelagic or mid-water species that have been holding my attention over the past few days, because they are brilliantly monstrous little things! Here's a selection (most backgrounds have been photoshopped out and replaced with black):

Female Anglerfish

Female angler fish (head detail).

Gulper Eel (head detail)

Hatchetfish

As usual though, we unfortunately also collected a lot of litter in our catches. It's not surprising - this far offshore there are few regulations regarding the disposal of waste at sea (it's legal to dump most things once you reach international waters), but it's still a shame to think that even out here in an environment that is so distant from us, we're still disturbing and impacting it.

The litter brought up in our first trawl.

A coke can in the net.  


Thursday, 11 April 2013

I'm on a boat...

After a rather hectic weekend of data processing and frantic presentation-writing in time for a meeting yesterday, it's now time to pack up my rigger boots again and head to Southampton for another two weeks at sea for what is likely to be my very last cruise as part of my PhD.

Mud and muddy animals! Yeah! 

This time, we're heading back out to the Porcupine Abyssal Plain to learn how to trawl for sample in deep-water! I've done a similar trip before, but the guys who knew all the details of how to work the gear and get it properly set up are starting to leave or retire now, so there's a bunch of us heading offshore to gather as much knowledge as we can (and hopefully catch some interesting things while we're out there too!).

An abyssal grenadier almost 5000m down

As well as a lot of mud-sampling (it just wouldn't be a trip to the abyss without it!), we'll be conducting at least two seabed trawls and hoping to collect another batch of samples to add to the long-term dataset which has been being collected at the PAP site since the early 1980s to track temporal changes in abyssal animals over the course of several decades to improve our understanding of the fragility of those systems. As always, I'll be on the lookout for fish specimens to bring back with me, and will of course keep you posted on our progress as we go. Keep your fingers crossed for us getting good weather!



Monday, 23 July 2012

A tale of half a million photographs

Well, this week has been busy! After a couple of issues with one of the batteries, the AUV team managed to get Autosub working perfectly again and we've been conducting photographic missions to the seafloor over the last five days, covering a survey track approximately 150km long and taking over 500,000 photographs in the process! It's the biggest AUV survey of an abyssal  region conducted to date (to the best of my knowledge) which is very cool and I'm hoping it will allow me to examine the distribution patterns of fish on the seafloor.

Autosub6000 being launched!
(I love that they've had to write 'harmless scientific instrument' on it in case it's mistaken for a giant yellow torpedo!

Deep-sea fish (particularly abyssal ones) are pretty difficult to study, partly because as the depth increases there's less and less food available which means fewer and fewer fish are able to survive. So, by the time you reach the abyssal plains at 4000-6000m, there are relatively few individuals around to find. One way around this problem is to use baited camera systems to lure the fish into your photographs, and it is an extremely efficient way of assessing the abundance and diversity of scavenging species in an ecosystem. However, scavenging species only account for around 25% of the  total fish diversity in the deep waters of the north-east Atlantic, so we need to use other techniques to identify the other 75%. A potential solution is to use unbaited cameras (such as Bathysnap), set to take images every few hours over several months then record which species pass by the camera in that time. Alternatively, we could catch specimens using trawl surveys to cover a larger area (which has the additional benefit that we can get definitive identifications for the species we catch), but we can't tell exactly whereabouts each fish was captured along the trawl's path.


However, none of these methods are really suitable for examining what the distribution patterns of fish are on the seafloor (i.e. do they cluster together or are they spread evenly over the seabed?) or how they respond to variations in habitat (e.g. how they react to the presence of hills or hard substrate), which are fairly fundamental questions to consider in understanding the ecology of any species. This is where Autosub comes into the picture. 

The forward-looking camera & flash on Autosub which  I use to look for fish.

As an AUV (Autonomous Underwater Vehicle), Autosub can be programmed to dive to the seafloor, follow a survey route while operating any on-board equipment (like cameras or sonar systems) and then return to the surface and the research ship without requiring any human intervention during its mission. Not only does this free the ship to conduct other work while the Autosub is getting on with its surveys, but it can also be programmed to conduct extremely long or complex surveys which may not be feasible using other methods. For our work, Autosub was set to conduct photographic transects roughly 35km - 90km in length, taking photographs every 0.86 seconds at a speed of around 1m per second. In case your mental arithmetic is a bit creaky, that's approximately 4200 photographs per hour! 



EDIT: Hooray! I've had the OK to post a few images, so here are a few of the better ones. They're cropped from a 5MP camera so they're not amazing quality, but they do the job!


Bathysaurus sp. (lizardfish) is an ambush predator with rather a lot  of teeth. They're not really orange, but the camera has a funny colour balance going on that I've not fixed yet.


A (not-colour-corrected) grenadier from yesterday's mission.


And another little grenadier from the first mission we did.


Anyway, after a rather full-on five days or so of AUV operations and between the two stills cameras mounted on Autosub, we've amassed well over 550,000 images and covered around 150km of abyssal seabed! A preliminary look through the photos is showing a decent number of fish as well which is brilliant news and means I'm going home with a really nice set of (pretty damn exciting) data! All of this is exceptionally cool, but sadly combines with the 100 hours of ROV footage from last month's cruise to sound the final death knell for my social life. Well, that and the prospect of several weeks on an Angolan oil rig at the end of the year, but that's still to be confirmed...

Examples of the rubbish we trawled up from the Porcupine Abyssal Plain during last year's cruise.
One thing that takes the shine off all this cool and exciting research though is that despite the fact that we're conducting surveys in 5000m of seawater in an area which isn't commercially targeted for anything (no fishing, mining, oil drilling etc.), we're still seeing litter everywhere, from planks of wood and scraps of metal to canvas bags to old books and old drinks cans and bottles. Last year when we were out here we trawled up boots, bottles and twice as much spent fuel (clinker) as animals by weight. It sucks. You'd think that maybe somewhere as remote as the ocean abysses might just be far enough away from us that they'd still be relatively pristine, but it's certainly not the case out here.


Finally, Jen Durden and I have written up a blog for the NOC's 'Picturing the Deep' blog which will hopefully go up online tomorrow (Tuesday at the latest I'd expect) so you can see some of it there at least in the meantime! 







Monday, 16 July 2012

Compressing Confectionery at 5000m

Because most of the research I do is largely based on survey work with a dash of theoretical modelling, I don’t get to spend a lot of time working in the lab or designing experiments. However, this time I came to sea armed with a plan!


Mmmmm.... Sciencey!


As you may remember from previous cruises, people typically spend a lot of their downtime drawing designs on polystyrene cups, sending them to the seabed and letting the high pressure of the seawater crush them into miniatures. After making plenty of my own cups, the novelty began to wear off a bit and I started wondering what would happen to other things if you sent them into the abyss. In particular, I wondered what would happen to air-filled chocolates.

So, before I joined the ship I bought myself a bag of fun-size sweets containing Maltesers, Milky Way Stars, Milky Ways, Mars bars  and Starburst (or Opal Fruits if you’re still determined to remain old skool about it). With the exception of the starburst, all of them contain air-filled spaces to a greater or lesser extent, and although I didn’t formally measure the volume of air in each type, I would estimate that the maltesers have the most air with starburst having the least. I would have also liked to have sent down Aeros and Wispas to see what happens to them, but my local supermarket has a crap selection and this was all they had in the mini-sizes. Now, on to the science part!

Hypotheses
  • The high pressure of the abyss (approximate 480 atmospheres) will crush the Maltesers and Milky Way Stars (being relatively brittle) completely. (Null hypothesis: Maltesers and Milky Way Stars will not crushed by the pressure.)
  • The high pressure of the abyss will cause the Milky Ways and Mars Bars to shrink by reducing the volume of air in the nougat. (Null hypothesis: Size will remain the same.)

I didn’t really expect anything to happen to the starburst since there are no gas-filled spaces in them, but it seemed a shame to leave them out so I chucked them in as well. For science!

Study Design

Deploying the sock

Using fun-sized packets of sweets was a handy way of getting a reasonable number of replicates without wasting large quantities of chocolate to do it (which is virtually a cardinal sin when you’re at sea for a long time!). The packets were divided into experimental and control groups as shown in table 1. The experimental packets were wrapped in a plastic bag and placed into our handy sock* which was then cable-tied onto the frame of the megacorer.  The control groups were placed in a walk-in fridge set to 4°C (the temperature of abyssal seawater).

Figure 1: The test chocolates (below) and controls (above)


Table 1: Numbers of each type of sweet used in the experiment
Confection Type
No. Experimental Packets
No. Control Packets
Maltesers
2
1
Milky Way
3
1
Mars Bars
3
1
Milky Way Stars
3
1
Starburst
2
1

The megacorer was then deployed and sent down to approximately 4800m on the Porcupine Abyssal Plain before being recovered. The total trip took around 5 hours from leaving the deck to coming back on board. Once the sweets were back on the ship, the packets were opened, photographed and tasted by a (semi-) willing panel of curious masters students. 

Data Analysis

The students were delighted at the prospect of eating salty, wet chocolate.

The data analysis comprised two parts: qualitative observations and taste-tests of the experimental sweets compared to the control groups and comparative measurements of the lengths of each of the sweets. Because there is only one Milky Way or Mars Bar per packet, the lengths of these were recorded both before and after the experiment to compare the change in length. The Maltesers, Milky Way Stars and Starburst could not be effectively measured prior to the experiment since that would have required opening the packets, but since there are several individual sweets per packet that was not considered a problem.

The measurements of Mars bars and Milky Ways were made using calipers (without opening the packet), and all other measures were taken from the photographs using photoshop.

Results
General Observations
Although none of the packets had visible holes in them, seawater did manage to get into all the experimental sweets. Aside from making the taste tests more salty that we generally like, it also makes it hard to separate the effects of melting vs. pressure.

Mars Bar

Figure A: Mean lengths of the control vs. experimental Mars Bars. Error bars show one standard deviation, p > 0.05.

Figure B: An experimental Mars Bar (below) after the experiment showing no visible damage compared to the control bar (above).
The Mars bars showed no significant change in length as a result of their journey to the abyss (figure A; paired t-test: p > 0.05) and displayed virtually no signs of crushing damage at all (figure B) and the consensus on taste agreed that they tasted pretty much exactly the same as the control bar.

Milky Way

Figure C: The lengths of control and experimental Milky Ways before and after the experiment. Error bars show one standard deviation, p > 0.05.

Figure D: Milky Ways appeared to sustain more damage from the pressure than the Mars Bars.

Just like the Mars bars, the Milky Ways showed no obvious change in length after the experiment (figure C), but there were more obvious signs of having been crushed by the pressure (figure D). The taste panel agreed that the experimental Milky Ways were 'wet and disgusting'.

Maltesers

Figure E: Control Maltesers (left) compared to an experimental set (right).

As expected, the journey to the abyss had the most dramatic effects on the Maltesers which were so crushed from the trip that the experimental ones couldn't be measured (figure E). Strangely enough, these were popular with the tasting team who agreed that despite the fact that they were wet and rather salty, they were actually quite pleasant in a strange, chewy way. 

Milky Way Stars

Figure F: Experimental (left) compared to control (right) Milky Way Stars. Funnily enough, no-one was willing to try eating the experimental ones.

Figure G: Mean lengths of Milky Way Stars from each packet. Error bars show one standard deviation, p < 0.05. 
These were badly affected by water leakage and resembled a weird chocolatey soup (figure F). One of the experimental packets contained chocolates that were significantly smaller than the control (figure G; GLM: p < 0.05), but the other experimental groups showed no difference. Not surprisingly, we drew the line at tasting these and so we'll never know if they were still edible!

Starburst
Figure H: Mean width of control (red) and experimental starburst. Error bars show one standard deviation, p < 0.05.

Figure H: Experimental (left) compared to control (right) starbursts.
Figure I: An opened starburst showing the extent to which they had dissolved. 
Finally, we have the starburst. These were also badly affected by water leakage which turned them into a strange soup. Measurements taken on the wrapped sweets showed that the experimental groups were significantly wider than the control (figure H; GLM: p < 0.05), but this is likely due to the fact that they were pretty well liquefied by the time we got them (figures I & J). As with the Milky Way Stars, no-one was willing to try eating these so what salty, wet, melted Starbursts actually taste like will sadly remain a mystery.

Conclusions
It's pretty clear from this short study that the biggest issue with sending Mars funsize sweets into the abyss is non-waterproof packaging, which was generally considered a bad thing in terms of the appeal and taste of everything except the Mars Bars which seemed to be entirely unaltered by the whole affair. The effects of pressure weren't particularly exciting on anything except the Maltesers which seem to have been completely crushed by their descent to 4800m. 

Also, although students will eat almost anything, it seems that salty, melted chocolate soup is a step too far!

Thanks
Thanks to Claire, Alice, Tish and John for daring to taste these!


* Socks make useful impromptu containers because: a) SOMEONE always has an old sock they don’t mind sacrificing to the cause and b) it’s relatively easy to shove cable ties through wool.